If one day the company has to close, you may be stuck without access to your data. The open-source side is important for me because the data accumulated in these software is really valuable. I have taken ReadCube into consideration, but quickly dismissed it because A) there is not Linux support and B) it is not open source. Ctrl-S to save the annotation to file (otherwise stored somewhere in the user home file).Īll these are open source software and are available on Linux! Straightforward use, nice annotations tools (F6 to open, double click items to make them permanent). Okular ( ) For reading and annotating PDF. And the killer feature: It is able to extract what you electronically annotated on the PDF (Highlights, comments)!! ![]() It also rename PDFs with the pattern you want. Zotfile ( ) An Zotero extension that monitor the download folder to let you attach downloaded PDF to existing entries. It also allow to sync between computer up to 300M, and extending the storage is quite cheap. You can then copy citation directly from zotero, generate a bibtex file, or use libreoffice extension. When you are on a paper's webpage, clicking on the button extracts its information, its PDF (if available) and do a capture of the webpage and store everything structured. ![]() Available as standalone app with multiple browser extension, or directly integrated into firefox. (ignoring mobile Mendeley for now.- Zotero ( ) A software that allows you to easily keep references to academic papers right from your browser. Depending on your settings, may be automatically uploaded to your Mendeley storage space next time you sync.Drag in a PDF from your desktop it will resolve from the PDF to a Mendeley library record item with the PDF attached (if its searchable).Note: the PDF will stay in that folder (and depending on your settings, also be uploaded into your Mendeley storage. You can create a Watch folder in the File menu any new PDFs added to that folder will be automatically added to your Mendeley Library and will resolve from a PDF to a library record with bibliographic metadata and the PDF attached (as long as the PDF is OCRed/Searchable).You can also use the drop down menus at the top of the screen: File -> Add files. Drag a PDF (must be OCRed/searchable) file into the space at the bottom of the record (Details Tab) you can also click on the space and it will open a browse menu (that opens in your Mendeley folder).Probably also all the stuff under the Web version as well.Add from Mendeley Research Catalog (see above).Mendeley Desktop Citations (be sure to click the 'Unpublished Work" if you don't want it to end up in the Mendeley Research Catalog!) In certain cases you may be able to automatically download a PDF directly into Mendeley using the Web Importer. Use blue Add button to add a file to a citation you can also drag a file into the space at the bottom of the record or you can click on the space to browse and add files on your desktop).Add it manually (using File menu) - bit of a pain to do it, but then its done.Many databases have an option to export a record as a RIS (sometimes it will just say EndNote) file which you can then import into your Mendeley library using the File menu.Look for a "Share This" or Export Citations button.Use the Web Importer bookmarklet which works with many journal publisher sites and other sites as well that have embedded COinS and other metadata - this will download the citation and may (depending.) also download the PDF. ![]() Add from Mendeley Research Catalog (will add PDFs if available and open access otherwise there is a link which will take you to the original publisher page for the item (via a DOI) and you can download it from there (you can use the WSU Libraries Proxy Bookmarklet to sign in with your WSU credentials to download the PDF, or just go into the library catalog to find and download it or make an Interlibrary Loan request for it).Getting things in to Mendeley Mendeley Web Citations (be sure to click the 'Unpublished Work" if you don't want it to end up in the Mendeley Research Catalog!)
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